.. cisformer documentation master file, created by
   sphinx-quickstart on Mon May 12 15:35:21 2025.
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Welcome to Cisformer's documentation!
=====================================

Cisformer is a novel Transformer-based deep learning framework for cross-modal prediction and regulatory inference in single-cell data.

.. toctree::
   :maxdepth: 1
   :caption: Contents:

   conception.md
   installation.md
   quickstart.md
   usage.md
   modules
   release.md

Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`